Michael Krauthammer
Latest
- COL10A1 expression distinguishes a subset of cancer-associated fibroblasts present in the stroma of high-risk basal cell carcinoma
- Innate acting memory Th1 cells modulate heterologous diseases
- Longitudinal cell-free DNA characterization by low-coverage whole-genome sequencing in patients undergoing high-dose radiotherapy
- Machine learning prediction of prime editing efficiency across diverse chromatin contexts
- Fragmentstein—facilitating data reuse for cell-free DNA fragment analysis
- Predicting prime editing efficiency and product purity by deep learning
- Live slow-frozen human tumor tissues viable for 2D, 3D, ex vivo cultures and single-cell RNAseq
- Oncolytic virotherapy-mediated anti-tumor response: A single-cell perspective
- AI support for ethical decision-making around resuscitation: proceed with care
- The Association of MUC16 Mutation with Tumor Mutation Burden and Its Prognostic Implications in Cutaneous Melanoma
- Timing COVID-19 - Synchronization of longitudinal patient data to the underlying disease progression using CRP as a temporal marker
- Reducing Annotation Burden Through Multimodal Learning
- Patient Similarity Analysis with Longitudinal Health Data
- Lost in Anonymization — A Data Anonymization Reference Classification Merging Legal and Technical Considerations
- Chromatin-Bound PARP1 Correlates with Upregulation of Inflammatory Genes in Response to Long-Term Treatment with Veliparib
- Chromatin-Bound PARP1 Correlates with Upregulation of Inflammatory Genes in Response to Long-Term Treatment with Veliparib.
- The Gene Expression Profile of Uropathogenic Escherichia coli in Women with Uncomplicated Urinary Tract Infections Is Recapitulated in the Mouse Model
- Prototyping a precision oncology 3.0 rapid learning platform
- Unraveling the etiology of primary malignant melanoma of the esophagus
- PySeqLab: an open source Python package for sequence labeling and segmentation
- Spitz nevi and Spitzoid melanomas: exome sequencing and comparison with conventional melanocytic nevi and melanomas.
- A Clinical Decision Support System for Monitoring Post-Colonoscopy Patient Follow-Up and Scheduling.
- Toward automated assessment of health Web page quality using the DISCERN instrument
- Interlesional diversity of T cell receptors in melanoma with immune checkpoints enriched in tissue-resident memory T cells.
- Future perspectives in melanoma research : Meeting report from the "Melanoma Bridge". Napoli, December 1st-4th 2015.
- RASopathy Gene Mutations in Melanoma.
- Germline MC1R status influences somatic mutation burden in melanoma.
- Integrated analysis of multidimensional omics data on cutaneous melanoma prognosis.
- Global copy number profiling of cancer genomes.
- Controlling testing volume for respiratory viruses using machine learning and text mining.
- Mutadelic: mutation analysis using description logic inferencing capabilities.
- Exome sequencing identifies recurrent mutations in NF1 and RASopathy genes in sun-exposed melanomas.
- Modulation of Sox10, HIF-1alpha, Survivin, and YAP by Minocycline in the Treatment of Neurodevelopmental Handicaps following Hypoxic Insult.
- Rare SF3B1 R625 mutations in cutaneous melanoma.
- Identification of PLX4032-resistance mechanisms and implications for novel RAF inhibitors.
- Mining images in biomedical publications: Detection and analysis of gel diagrams.
- Computational analysis in cancer exome sequencing.
- Adjusting for background mutation frequency biases improves the identification of cancer driver genes.
- Next Generation Cancer Data Discovery, Access, and Integration Using Prizms and Nanopublications.
- Complementary ensemble clustering of biomedical data.
- Modeling the neurovascular niche: unbiased transcriptome analysis of the murine subventricular zone in response to hypoxic insult.
- Type II p21-activated kinases (PAKs) are regulated by an autoinhibitory pseudosubstrate.
- Enhancing Clustering by Exploiting Complementary Data Modalities in the Medical Domain.
- Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.
- A semantic web framework to integrate cancer omics data with biological knowledge
- Finding and accessing diagrams in biomedical publications.
- In vivo identification of tumor- suppressive PTEN ceRNAs in an oncogenic BRAF-induced mouse model of melanoma.
- Rare nonsynonymous variants in alpha-4 nicotinic acetylcholine receptor gene protect against nicotine dependence.
- MicroRNA signatures differentiate melanoma subtypes.
- Phosphoproteomic screen identifies potential therapeutic targets in melanoma.
- MU2A--reconciling the genome and transcriptome to determine the effects of base substitutions.
- Exploring the use of social media to measure journal article impact.
- A new pivoting and iterative text detection algorithm for biomedical images
- PLX4032, a selective BRAF(V600E) kinase inhibitor, activates the ERK pathway and enhances cell migration and proliferation of BRAF melanoma cells.
- Genome-wide methylation and expression profiling identifies promoter characteristics affecting demethylation-induced gene up-regulation in melanoma.
- Embedding the guideline elements model in web ontology language.
- Enriching PubMed related article search with sentence level co-citations.
- Semantic web data warehousing for caGrid.
- Structural similarity assessment for drug sensitivity prediction in cancer
- Integrative analysis of epigenetic modulation in melanoma cell response to decitabine: clinical implications.
- Proteomic-based detection of a protein cluster dysregulated during cardiovascular development identifies biomarkers of congenital heart defects.
- Using semantic web technologies to annotate and align microarray designs.
- Exploring the use of image text for biomedical literature retrieval.
- MEDME: an experimental and analytical methodology for the estimation of DNA methylation levels based on microarray derived MeDIP-enrichment.
- Yale Image Finder (YIF): a new search engine for retrieving biomedical images.
- Introducing meta-services for biomedical information extraction.
- Overview of BioCreative II gene normalization.
- Leveraging the structure of the Semantic Web to enhance information retrieval for proteomics.
- Mapping terms to UMLS concepts of the same semantic type.
- Genomewide linkage scan for nicotine dependence: identification of a chromosome 5 risk locus.
- The BiolAD-DB system : an informatics system for clinical and genetic data.
- Shallow semantic parsing of randomized controlled trial reports.
- Towards semantic role labeling & IE in the medical literature.
- Term identification in the biomedical literature.
- Molecular triangulation: bridging linkage and molecular-network information for identifying candidate genes in Alzheimer's disease.
- Probabilistic inference of molecular networks from noisy data sources.
- GeneWays: a system for extracting, analyzing, visualizing, and integrating molecular pathway data.
- Of truth and pathways: Chasing bits of information through myriads of articles
- Representing nested semantic information in a linear string of text using XML.