Bioinformatics

Oncolytic Virotherapy Mediated Anti-Tumor Response: A Single-Cell Perspective

Talimogene laherparepvec (T-VEC) is a genetically modified herpes simplex 1 virus (HSV-1), approved for cancer therapy. We investigated its effect on the clinical, histological, single-cell transcriptomic and immune repertoire level using repeated …

Long-read sequencing - Part I

An introduction to long-read sequencing.

Single Cell RNA Sequencing

Cancer on the cell level.

Drug-Drug Interactions

Novel computational method for drug-drug interaction predictions which are an important consideration for patient treatment.

We are looking for Masters Students!

We are currently looking for Master’s students in the field of bioinformatics for the following topics Data integration in Cancer Genomics The project’s aim is to characterize the effects of transcriptional and epigenetic processes on mutational patterns in cancer. The student should have basic experience with Unix systems and some experience with at least one scripting language (e.g. Python, R or bash). Prior experience with genomics software (mappers, samtools or variant callers) is an advantage.